Modules:
- 
          analysis–Updated OOP approach to data analysis. 
- 
          bb–
- 
          cli–Exposes a terminal interface to TIES 20. 
- 
          config–
- 
          generator–
- 
          helpers–A list of functions with a clear purpose that does 
- 
          ligand–
- 
          ligandmap–
- 
          md–
- 
          modules–
- 
          overlay–
- 
          pair–
- 
          parsing–
- 
          protein–
- 
          scripts–
- 
          topology_superimposer–The main module responsible for the superimposition.